Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIKLKDFEGPLDLLLHLVSKYQMDIYDVPITEVIEQYLAYVSTLQAMRLEVTGEYMVMASQLMLIKSRKLLPKVAEVTDLGDDLEQDLLSQIEEYRKFKLLGEHLEAKHQERAQYYSKAPTEL-IYEDAELVH-DKTTIDLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEAQNVQEVITLFLATLELIKTQELILVQEESFGDIYLMEKKEESQVPQS
3W6J Chain:A ((8-168))-NVKIEAFEGPLDLLLHLINRYEIDIYDIPVAQITEQYMAYIHAMQELELDIASEYLVMAATLLAIKSKMLLPP---------DPREELTQRLLEYKKFKEAARELKRREEERALLFTKPPSDLSAYA------LDVNVYDMLGALSKLLRRKK------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3W6J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 300 -59001 -196.67 -433.83
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -196.67
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.510

(partial model without unconserved sides chains):
PDB file : Tito_3W6J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3W6J-query.scw
PDB file : Tito_Scwrl_3W6J.pdb: