Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKTVGNDLVRNQLHADRKWYLILGFVLIIFGLVLFSSLPFATFSVVFLFGILMMVGGVLHLIAALSVFKGGSRWLWALFGVLYLMAGYYAFSTPVTTAV----VLTSLLSIALIIAGVIRTINAFLLRPIAGWGWTLFSGLLTLATGILILVSKDSPFWVLGMFLAVDILFQGINFLGLASAIKHLPSSSKTVS
5M8A Chain:A ((276-346))---------------------------------------------------LAMVVNALLLIMGVAVFKSGAVQDPSFFGLYQALSNPDMVSNPVLAEAARSGVLSTLFAVALLASGQNSTI------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5M8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 169 -41540 -245.80 -619.99
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.48

3D Compatibility (PKB) : -245.80
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.48
QMean score : 0.172

(partial model without unconserved sides chains):
PDB file : Tito_5M8A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5M8A-query.scw
PDB file : Tito_Scwrl_5M8A.pdb: