Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPKTLQFGITNFEIDFKDLVMNTMIKNKRFENDVEFRGADIKDSRAVVILLHGRRQNADTIYELAE--KIGFTDITYILPLAPEL-----------TWYPRGFMRDLEDNQPYLSVALE------RIHYIITDLKNQNIKPENIFLMGFSQGACIVSQYLWENPQKLGGVIAFTGGL-----FGPELTYTSHEGLPINGTQLIFTGGKEDSWVPEQRVRDTAALFEKLGGNVTTKIYSGRDHLVSDEEVE-----LAKTLLNI
4F21 Chain:A ((34-244))-----------------------------------------KQARFCVIWLH--GADGHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYD---IKSL---SLNRVVDVEINSSIAKVNKLIDSQVNQ-IASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWDNFKGKIT-SINKGLPI-----LVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVCMEEIKDISNFIAKTF---


General information:
TITO was launched using:
RESULT:

Template: 4F21.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 866 -37790 -43.64 -215.94
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -43.64
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.459

(partial model without unconserved sides chains):
PDB file : Tito_4F21.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F21-query.scw
PDB file : Tito_Scwrl_4F21.pdb: