Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFTKKDLLQQRMLIDQLRTQNSLSPQNAAKLGQSIASSWERSASAAIPKERFAAP----------LLEKKSASQNALDLALSQCADDLRHIAEQSSMVIAVGDIGSTIIWTASSAQMQSAAERVHFVQGGQWREEFVGTNALALSLKTQQSSCVFSNEHYMESIHDWVCYAAPIIDPYSKQTLGVVDLSTTWKNHNTLGILAAERCASIIQSALLEQQRQQLHIRAFSTPQVKFNGKSLLLTPRQIEILTILALCPHGLTLENLYQALYGERKVSMGTLKAEMSQLRDILGGLLGSRPYRLLVHVEADFLQAEQALDAGYVASALQLYAGVFLAKTESPFLCAWRDCLESRLSDAIFKAQETDLLLKHLAHFPEAIDAVERLMELLPSEHPAHQLLVKYIDSPKLS
4LRY Chain:C ((16-164))----------------------------------IATSWER-CNKLMKRETWNVPHQAQGVTFASIYRRKKA---MLTLGQAALEDAWEYMAPRECALFIL-DETACILSRNGDPQTLQQLSALGFNDGTYCAEGIIGTCALSLAAISGQAVKTMADQHFKQVLWNWAFCATPLFDSKGRLT-GTIALA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4LRY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 577 -24886 -43.13 -179.04
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain C : 0.59

3D Compatibility (PKB) : -43.13
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.405

(partial model without unconserved sides chains):
PDB file : Tito_4LRY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LRY-query.scw
PDB file : Tito_Scwrl_4LRY.pdb: