Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMINKKPRIPSPVQIPEHLSFLQGFRDYLVAQTVSPHTRNAYLSDLIQCSEIHKKNRLPD-WTSDDIS---DVLIELTKVGKSPRSIARCLSALRQFYKSLREQKLRSDNPVATHHSPKIGRALPKDLSEEDVEALIQAPDITTALGLRDRAMFEVLYACGLRVSELLNLRLELINLKQGYLRI-TGKGNKERLVPLGQYACDWVERYLNEARPQLYKSSTDYLFLTQHGGIMSRQNFWYAIKRYALQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQVRMQQLHEKHHPRG
5HXY Chain:A ((38-316))------------ETNEYLS---RFVEYMTGERKSRYTIKEYRFLVDQF--LSFMNKKPDEITPMDIERYKNFLAVKKRYSKTSQYLA--IKAVKLFYKALDLRVPINLTP------PKRPSHMPVYLSEDEAKRLIEAASSDT----RMYAIVSVLAYTGVRVGELCNLKISDVDLQESIINVRSGKGDKDRIVIMAEECVKALGSYLDLRLSM--DTDNDYLFVSNRRVRFDTSTIERMIRDLGKKAGIQKKVTPHVLRHTFATSVLRNGGDIRFIQQILGHASVATTQIYTHLNDSALREMYTQHRPR-


General information:
TITO was launched using:
RESULT:

Template: 5HXY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1067 11629 10.90 42.44
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 10.90
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.499

(partial model without unconserved sides chains):
PDB file : Tito_5HXY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HXY-query.scw
PDB file : Tito_Scwrl_5HXY.pdb: