Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMEDFVMKFWQRLFTAFLQRFHLMRFFGRNRSFKELHQSSYAQEISKNLSKRLLNASRAQTNDLLKQFD-THLMGLTEEQAYTQQMTVGLNEVTHEKPLTWWQHLWYCYRNPFNILLSLLALIAF----FTDDLTGST------IISVMVILSTLLRYWQEAKSNQAADALKAMVSNTATVLRHQVSAEDLELMHERYGIDTKNQTTHQFEISIQYLVPGDVILLSAGDMIPADCRILSAKD--LFVSQAAMTGESMPVEKFPLQKNLEETSALELD--NIVFMGTNIVSGSAQAVVLSTGIQTYFGALAHRVTATDRSTTAFQMGVNKVSWLLIRFMLVMAPVVLFIN------GFTKGDWAEAFLF----ALSVAVGLTPEMLPMIVTSTLAKGAVFLSKKKVIVKRLDAIQNFGAMDVLCTDKTGTLTQDKIFLSQHIDVQGEKSDFVLMQAFL---NSYYQTG--LKN-----------LLDVAVLEAV--DDQIKIQKLR--YKKLDEV-------------------------------------------PFDFDRRRMSVVVKTPQQKA-------HMITKGAVEEMLKVCRYVEVNGKVEPLTKQREVAIEALTQRY--NRDGLRVVAVAYREFKNHQENYSVVD-------ESDLILIGYITFLDPPKESAKEAVQSLHAHGVTVKVLTGDNEFVTQKVCREIGL------NYDQVLLGGVIETLTDQQLKRAVEQYHIFAKLSPVHKERIVEQLKVNGHVVGFLGDGINDAAAIRAADIGISVDTAVDIAKESADLILLEKSLMVLEKGVIEGRRTFANMLKYIKMTASSNFGNVFSVLIASAFIPFLPMLPIHLLIQNLLYD-VSQIVIPFDNVDEELIAKPQRWQPEEVGRFMVVFGPISSIFDMITFGVMWFVFSANTPEHQTLFQSGWFVVGLLTQTLIVHMIRTAQIPFIQSRAATPLLIMTAVIMCIGIFLPMGPLASYLKLQALPLSYFLYLPLILGAYICVTQWVKKIYIRRYGWQ
4YCN Chain:A ((4-826))------------------------------------------------------AHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRA-----------DRKSVQ---------RIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKH--TEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPR-SPKE--------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YCN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3518 57454 16.33 80.69
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : 16.33
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.358

(partial model without unconserved sides chains):
PDB file : Tito_4YCN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YCN-query.scw
PDB file : Tito_Scwrl_4YCN.pdb: