Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLIFLPGASGSTTFWHPLIEKLPQQYRAKIIGYPSFGDTP-ESLEVKSFEDLTNYVVNQIH-------DESVIIAQSMGGIFAVTAALQKPQLVKGLVLIATS-----------GGI---------NLEPFNVQDWREAYRQAFLKYPD----------WFITTN-------------ANYEEFLSDINIKTLLIWGDNDPVSPVQVGQYLNQKFENSTLYVVKGGDHQLAEKYADEVAVQIKNYLKGLM
1WPR Chain:A ((22-269))-SIMFAPGFGCDQSVWNAVAPAFEEDHRVILFDYVGSGHSDL--YDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPYSSLKQMEARGHCPHMSHPDETIQLIGDYLKA--


General information:
TITO was launched using:
RESULT:

Template: 1WPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 916 -35327 -38.57 -181.16
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -38.57
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_1WPR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1WPR-query.scw
PDB file : Tito_Scwrl_1WPR.pdb: