Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAIANNHVVSFHYKLTNAEGETLDQSQ-GEPLAYLHGAGNIIPGLENALTGKTVGDKFTVNVPAAEGYGEYNPDLVQEVPAQMFQGVDNIQPGMQFQAQTDDGVQIVTVKAVEGDNVIVDANFPLAGQDLTFEVEIVEIREASQEELDHGHVHGAGGHHH
2KFW Chain:A ((3-147))---VAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEEL-------------


General information:
TITO was launched using:
RESULT:

Template: 2KFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 604 -2160 -3.58 -15.00
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : -3.58
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.610

(partial model without unconserved sides chains):
PDB file : Tito_2KFW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KFW-query.scw
PDB file : Tito_Scwrl_2KFW.pdb: