Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQAIEKRNSLFNSLTQAVFDKNMANFWLQKINPLWSVQHGLVQIVKKEFVAHDTVSLTLKCNRLVKMGAAGQHHPVIVEIAGRRYERTYSLTQ-IDAEHLRLTVKKVADGIVSNWFIAESKIGDVFELGQPYGD--MQQNIQTPKLIMLAAGSGITPMLSLITAIKQSQQLEKTQVQLLYWVKQRSDAAFTEYFEQVAEQNPNFSYQVFYTQETPNDE---RLNAEHLALVDGIENS------TVYACGPSGFIS-TVEQLFEKAPTVLTEAFSLINESSADDIGYVNVTLTQSNKVIAIPKGQSILVSLEHEGLKPTHGCRMGICNKCVCSKTQGSTRNLLNGSQNTEPSQLLKICVNSAQSDLVIDL
1GVH Chain:A ((204-377))--------------------------------------------------------------------------------------RQYSLTRKPDGKGYRIAVKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFMAVADDTP-VTLISAGVGQTPMLAMLDTLAKAGH--TAQVNWFHAAENGDVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAKGQFDSEGLMDLSKLEGAFSDPTMQFYLCGPVGFMQFTAKQLVD----------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1GVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 685 -3161 -4.61 -19.63
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -4.61
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.409

(partial model without unconserved sides chains):
PDB file : Tito_1GVH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GVH-query.scw
PDB file : Tito_Scwrl_1GVH.pdb: