Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITVVIIDDDPFVTKSLQTILESTKEIRVLGIGHCAKDALVLYETHRPDVLLTDIRMPKQTGIDAAKEILAKFPKAILLLLTTFKDEEYIREAFSIGVKGYLIKQNL-QAIIPSVKSAYNGQAVFGNEIIETFTQMM--KNKPTIDSHAYASFSERELAIIKEVAAGKNNKEIADALYLSDGTVRNYISQLLEKLDLRDRTQLAIYFYQHLQ
5HEV Chain:A ((1-206))MIKVLLVDDHEMVRLGVSSYLSIQEDIEVIGEAENGRQGYEKAMALRPDVILMDLVMEEMDGIESTKAILKDWPKAKIIIVTSFIDDEKVYPAIEAGAAGYLLKTSTAHEIADAIRATQRGERVLEPEVTTKMMEKMSRRNDPVL----HEELTNRENEILMLISEGKSNQEIADELFITLKTVKTHVSNILAKLEVEDRTQAAIYAFKH--


General information:
TITO was launched using:
RESULT:

Template: 5HEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 913 -70189 -76.88 -345.76
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -76.88
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.698

(partial model without unconserved sides chains):
PDB file : Tito_5HEV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HEV-query.scw
PDB file : Tito_Scwrl_5HEV.pdb: