Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTGRFTRPQWSLATGRHYASSGHSAASSCSTHTLKVNQTESYRPGPDDSGTYSANLRDSPSRTMSNTSVSVSPMDSSSPQEWGRSFRLFNSCRFLTSASGSRQRDGSIGQLYRSTFLHGRQGRGSSVGPEAERPLLGSSMIHQPQSSFFGAFSGQGGRYSFWPPDVNASGVLTAASPYAASNPSAPLSTASPLLGSSRFLGTGISPRGLADGHAVHRVVASCAMGSVVCTVSPGQNELPLAMNALRTHLALRGKTIIQGDAAHPLEIRKGPLIGAGGFAKVFAGVDTVRGELVAIKEIDISGVDDVKALNAIEAEFALLKSLHHPNIVSYSLFEHSKSQKVCRIAMELLAGDSTLHLLQKFGPLTEAVLRIVARSVLRAIRFIHKEGIFHRDIKPANILVSHRGEVKLCDFGCSKRVSELNKAASCIIGTPVYMAPEFIKGEA-NHKADIWSMACALFELSTGLLPWYHSGVKDNLPLMFYITTTSESPMVLPSPEAKSEFSAEFLSFMELCFTRNVANRPEADDLLKHPWITGSRLAPVPNLPSAVLSLHQESSAVFRAFGSPGKSSTFSSPRDSAADRDDMSFNGSDGLQKSVSTTPTLNPAEEEMACQQELETVAAATALELCSLLVCSLEIPPRTAQETVTGEVGSGTGDTSPSLTRTFSIHSPALSHRGGGVSASVAEFLSPVYTPEHSMVHENFYYSQVPLGASAGNFVLPPGLDLDGAPPQQQYLRINEEGNLDMVYLPGDEMEDSVHGRSTFGDSVYGSFHAGRIVSPARNSSFSRGTLSPRVAAGPNTVGVADGPFSPLLGISGVFSRRESPSRGGPSVPSSPQGIPAPPLLYRPGPSTTFVSQPSSHTGSMHTSHVSPTSTSKAGSNVDAATPHTPRSNSPTSTQRSESFRGLPEKLKTHADGKLHMSFSVNTAPGCAVNVELNVDVADVQCKVVDNQPNFVVAFTDDVRSQIANKIKEVAEHSSSGKPAQTAGTHASSLSPLCGMEARRSVSAGGGHFYNSPLFAAASKATPRPLSRVSTGSAQRLVAVPREALAGYSSYSGEEGSDVDSHTSSPVTAGWNERVGK
4NZW Chain:B ((28-273))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IGKGSFGEVYKGIDNHTKEVVAIKIIDLE--EAEDEIEDIQQEITVLSQCDSPYITRY-FGSYLKSTKLW-IIMEYLGGGSALDLL-KPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLAAFGVAG--------------TPFWMAPEVIKQ--YDFKADIWSLGITAIELAKGEPP-----NSDLHPMRVLFLIPKNSP-----PTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFIT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4NZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1115 -97398 -87.35 -425.32
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.57

3D Compatibility (PKB) : -87.35
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.472

(partial model without unconserved sides chains):
PDB file : Tito_4NZW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NZW-query.scw
PDB file : Tito_Scwrl_4NZW.pdb: