Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDSVRIF
4UW4 Chain:A ((4-136))---VPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDSVRIF


General information:
TITO was launched using:
RESULT:

Template: 4UW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 670 -73638 -109.91 -553.67
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.99

3D Compatibility (PKB) : -109.91
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.99
QMean score : 0.754

(partial model without unconserved sides chains):
PDB file : Tito_4UW4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UW4-query.scw
PDB file : Tito_Scwrl_4UW4.pdb: