Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRNIGQAGKILADSGYQGLMKIYPQAQTPRKSSKLKPLTVEDKACNHALSKERSKVENIFAKVKTFKMFSTTYRNHRKRFGLRMNLIAGIINHELGF
5VJ7 Chain:B ((100-120))-------GKILAIGAYTGIVEVYPIAK----------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5VJ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 18 -2267 -125.92 -113.33
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : -125.92
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.212

(partial model without unconserved sides chains):
PDB file : Tito_5VJ7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5VJ7-query.scw
PDB file : Tito_Scwrl_5VJ7.pdb: