Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIQWWQILLLTLYSAYQICDELTIVSSAGSPVFAGFITGLIMGDVTTGLLIGGNLQLFVLGVGTFGGASRIDATSGAVLATAFSVSQGIDAPLAITTIAVPVAALLTYFDVLGRMTTTFFAHRVDAAIE-RFDYKGIERNYLLGAIPWALSRALPVFFALAFGGAFVQSVVDFVEAYKWVADGLTLAGRMLPGLGFAILLRYLPVKRNLHYLAMGFGLTAMLTVLYSYVTGLGGAVAGIVGTLPAEVAQKIGFVNNFKGLSMIGISIVGIFLAVLHFKNSQKVAVAAPSTPSESGEIEDDEF
2G4O Chain:A ((207-323))--------------AYQHVDAATIHMITDPGRFDVIVTDNLFGDIIT------DLAAAVCGGIGLAASGNIDATRAN--PSMFEPVHGSAPDIAGQGIADPTAAIMSVALLLSHLGEHDAAARVDRAVEAHLATRGSER-------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2G4O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 309 -39997 -129.44 -344.80
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : -129.44
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.091

(partial model without unconserved sides chains):
PDB file : Tito_2G4O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2G4O-query.scw
PDB file : Tito_Scwrl_2G4O.pdb: