Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLHYTKEDLLELGAEITTREIYQQPDVWREAFEFYQAKREEIAAFLQEIADKHDYIKVILTGAGTSAYVGDTLLPYFKEVYDERKWNFNAIATTDIVANPATYLKKDVATVLVSFARSGNSPESVATVDLAKSLVDELYQVTITCATDGKLALQAHGDDRNLLLLQPAVSNDAGFAMTSSFTSMMLTALLVFDPTEFAVKSERFEVVSSLARKVL-DKAEDVKELVDLDFNRVIYLGAGPFFGLAHEAQLKILELTAGQVATMYESPVGFRHGPKSLINDNTVVLVFGTTTDYTRKYDLDLVREVAGDQIARRVVLLSDQAFGL-ENVKEVALGCGG----VLNDIYRVFPYIVYAQLFALLTSLKVENKPDTPSPTGTVNRVVQGVIIHEYQK
3ODP Chain:A ((5-392))LLGYSEDYLKERKGYITAKEICNQPKLWRETYEIILSQREKLKSFLDNFAKKPN-AKIVITGAGSSAFVGNSVVSYLNA---KENIKIEAIATTDIVSHPFYYLKKDEPTLLISCARSGNSPESTAAVTLAEKIVDDISHLIITCNSEGKLALHAKRNYNSFLLLMPEESNDKGFAMTGSFSTMLLSCLLIFNLDKLESIGKQIESISMQGEKVLVNNVELMKKIVGEKFKRTVYLGAANAFGLAKESALKVLELTAGKIATLYDTPLGFRHGPKSIIDDETLIVIFFSNDTYAREYEYDLLKEVYSQNGNHKVLAISEYEDKLIEDNSDYFIAINKEEQEYEDDSFLSLDYLLNAQMYAFINSMELGIGPDNPCPTGEVNRVVKGVIIHDY--


General information:
TITO was launched using:
RESULT:

Template: 3ODP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2328 -199425 -85.66 -522.05
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.87

3D Compatibility (PKB) : -85.66
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.549

(partial model without unconserved sides chains):
PDB file : Tito_3ODP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ODP-query.scw
PDB file : Tito_Scwrl_3ODP.pdb: