Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSLTGVSNPTTDSARLVLAEANKAFADDSLTEQGLRDILQTVKDAIASLESIKESQSATKDGGQTAGKETAGEDESANQTQEISQGIK
1J1D Chain:B ((20-63))--------QTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQTIYNLEA-------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1J1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 31 1216 39.23 27.64
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain B : 0.70

3D Compatibility (PKB) : 39.23
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.634

(partial model without unconserved sides chains):
PDB file : Tito_1J1D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1J1D-query.scw
PDB file : Tito_Scwrl_1J1D.pdb: