Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFFPSEQEQIEKFEKDHVAQHYFEVLRTLI---SKKSVFAQQVGLKEVANYLGE-IFKRVGAEVEIDESYTAPFVMAHFKSSRPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTDLDKYLEKHADKLRGADLLVWEQGTKNALEQLEISGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGL-ELPLLQEERMAFLKRFFFEPALNIEGIQSGYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGFDKVELYYTLGEMSYRSDMSAPAILNVIELAKKFYPQGVSVLPTTAGTGPMHTVFDALEV--PMVAFGLGNANSRDHGGDENVRIADYYTHIELVEELIRSYE
4MMO Chain:A ((3-434))-----------------------EELYTLIEFLKKPSISATGEGIDETANYLKETVEKLLGVKANLEKTKGHPVVYAEINVNA--KKTLLIYNHYDVQPVDPISEWKRAPFSATIENDRIYARGASDNKGTLMARLFAI-KHLLDKNELNVNVKLLYEGEEEIGSVNLEDYIEKNTNKLK-ADSVIMEGAGLDPKGRPQIVLGVKGLLYVELVLDYGTKDLHSSNAPLVRNPCIDLAKIISTLVDMGGRVLIEGFYDDVRELTEEERELIKKY-DIDVEELKKALGFKELKYNEKEKIA--EALLTYPTCNVDGFECGYTGKGSKTIVPHRAFAKLDFRLVPNQDPYKVFELLKKHLQKAGFNGEILAHGF-EYPVRTSVNSTVVKAMIESAKKVYGTEPQVIPNSAGTQPMGLFVYKLGIRDAVSAIGAGGYYSNAHAPNENIKIDDYYKAIKHTEEFLKLY-


General information:
TITO was launched using:
RESULT:

Template: 4MMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2291 78311 34.18 184.26
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : 34.18
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.498

(partial model without unconserved sides chains):
PDB file : Tito_4MMO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MMO-query.scw
PDB file : Tito_Scwrl_4MMO.pdb: