Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKKSILTTLLFAVLYFLCMGIGVLLGNLFDQTGNMFYAPAFTALVGGSVYMILVAKVPRFGAITTIGLVIALFFLGTKHGAGSFLPGIICGLLADGVAHLGKYKDKTKNFLSFIIFAFSTTGPILLMW--IAPKAYMATLLARGKSQEYIDRIMVAPNPGTVLLFIASIVIGALVGALIGQALSKKFAQKI
2GKS Chain:A ((223-289))-----------------------------------------------------------------------------------------------------KYYDKKKTILAFLPLAMRMAGPREALWHGIIRRNYGATHFIVGRDH--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2GKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 51 -5611 -110.02 -127.52
target 2D structure prediction score : 0.25
Monomeric hydrophicity matching model chain A : 0.43

3D Compatibility (PKB) : -110.02
2D Compatibility (Sec. Struct. Predict.) : 0.25
1D Compatibility (Hydrophobicity) : 0.43
QMean score : 0.262

(partial model without unconserved sides chains):
PDB file : Tito_2GKS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GKS-query.scw
PDB file : Tito_Scwrl_2GKS.pdb: