Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLNEVKEFVKELRGLSQEELAKRENELKKELFELRFQAATGQLEQTARLKEVKKQIARIKTVQSEAK
3J3W Chain:X ((5-56))-----------EIRDLTTAEIEQKVKSLKEELFNLRFQLATGQLENTARIREVRKAIARMKTV-----


General information:
TITO was launched using:
RESULT:

Template: 3J3W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 89 -4619 -51.89 -88.82
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain X : 0.85

3D Compatibility (PKB) : -51.89
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.749

(partial model without unconserved sides chains):
PDB file : Tito_3J3W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J3W-query.scw
PDB file : Tito_Scwrl_3J3W.pdb: