Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTFTIHTVESAPAEVKE-ILETVEKDNNGYIPNLIGLLANAPTVLEAYQIVSS--IHRRNSLTPVEREVVQITAAVTNGCAFCVAGHTAFSIKQIQMNDDLI--QALRNRTPIETDPKLDTLAKFTLAVINTKGRVGDEALSEFLEAGYTQQNALDVVFGVSLAILCNYANNLANTPINPELQPYA
2PRR Chain:A ((9-178))ISRYPVPELAALPDDIRQRILEV--QDKAGFVPNVFLTLAHRPDEFRAFFAYHDALMLKDGGLTKGEREMIVVATSAANQCLYCVVAHGA--ILRIYEKKPLVADQVAVNYLKADIPPRQRAMLDFALKVCKASHEVNEADFEALREHGFTDEDAWDI---AAITAFFGLSNRMANT----------


General information:
TITO was launched using:
RESULT:

Template: 2PRR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 683 -5710 -8.36 -34.61
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -8.36
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.415

(partial model without unconserved sides chains):
PDB file : Tito_2PRR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PRR-query.scw
PDB file : Tito_Scwrl_2PRR.pdb: