Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTYLPVALTIAGTDPSGGAGIMADLKSFQARDVYGMAVVTSLVAQNTRGVQLIEHVSPQMLKAQLESIFSDIPPQAVKTGMLATTEIMEIIQPYLKKLDC-PYVLDPVMVATSGDALIDSSARDYLKTNLLPLATIITPNLPEAEEIVGF-SIHDPEDMQRAGRLILKEFGPQSVVIKGGHLKGGAKDFLFTKNEQFVWESPRIQTCHTHGTGCTFAAVITAELAKGKSLYQAVDKAKAFITKAI--QDAPQLGHGSGPVNHTTFKD
1JXH Chain:A ((28-283))------ALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAENTCGVQSVYRIEPDFVAAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRHHVRNVVLDTVML------LLSPSAIETLRVRLLPQVSLITPNLPEAAALLDAPHARTEQEMLAQGRALLA-MGCEAVLMKG--------DWLFTREGEQRF---RVNTKNTHGTGCTLSAALAALRPRHRSWGETVNEAKAWLSAALAQADTLEVGKGIGPVHH-----


General information:
TITO was launched using:
RESULT:

Template: 1JXH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1309 -74095 -56.60 -316.65
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -56.60
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.430

(partial model without unconserved sides chains):
PDB file : Tito_1JXH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JXH-query.scw
PDB file : Tito_Scwrl_1JXH.pdb: