Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKQIHPLILFSFFGIMMFILIINRPLNDSQSFKTKSNIAQIEAQALKHLDKPIIDLSGWQRPEEINYDALSQNISGAIVRVHSGTQTTKENDASFINGIDKAYKSHITELQKRNVPVAVYAYVAGKSVQEMEKAAEVFYNAASPYSPSYYWLDVEDKTMSNMNEGVENFRAKLASLGAKNIGIYVGVYFMEEHSIDTGKFTSVWIPSYGSDSGFLESSPKTDLDYDIHQYTSKGKIAGFDHDLDINVISPLKNKEETFRKLFLKP
3HMC Chain:A ((7-187))-----------------------------------------------------IIDISKWN--GDINWSIAKQHIDFIIARVQDGS-----------NYVDPLYKGYVQAMKQHGIPFGNYAFCRFVSIADAKKEAQDFWNRGDK-SATVWVADVEVKTMNDMRAGTQAFIDELYRLGAKKVGLYVGHHMYTPFGMANVKSDFVWIPRYGGN--------KPAYPCDIWQYTETGNVPGIG-KCDLN--SLIGNKSLSW-------


General information:
TITO was launched using:
RESULT:

Template: 3HMC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 982 -104391 -106.30 -576.74
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -106.30
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.549

(partial model without unconserved sides chains):
PDB file : Tito_3HMC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HMC-query.scw
PDB file : Tito_Scwrl_3HMC.pdb: