Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALAKIVFASMTGNTEEIADIVADKLRDLGLDVDVDECTTVDASDFLEADIAIVATYTYGDGELPDEMMDFYEDLADLNLNGKIYGVVGSGDTFYDEFCKAVDDFDRVFVSTGAEKGSECVKVDLSAEEEDIERLEQFAEELAAKVG
5LJI Chain:A ((2-146))-ALAKIVFASMTGNTEEIADIVADKLRDLGLDVDVDECTTVDASDFLEADIAIVATYTYGDGELPDEMMDFYEDLADLNLNGKIYGVVGSGDTFYDEFCKAVDDFDRVFVSTGAEKGSECVKVDLSAEEEDIERLEQFAEELAAKV-


General information:
TITO was launched using:
RESULT:

Template: 5LJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 810 -100336 -123.87 -691.97
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.99

3D Compatibility (PKB) : -123.87
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.99
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_5LJI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LJI-query.scw
PDB file : Tito_Scwrl_5LJI.pdb: