Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLDGYTRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEASDLVETVANIRRYQMFGINLSMPYKEQVIPYLDKLSDEARLIGAVNTVVNENGNLIGYNTDGKGFFKCLP--SFTISGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRS----VSMEKTRPYLDKLQEQTGFKVDLCALEYVSELQARIAESDLLVNATSVGM---DGQSSPVPENIVLPETLLVADIIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKYQ
3TNL Chain:A ((32-314))-RITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMNLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVNDDGVLTGHITDGTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKT---VEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPE-LIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEIL-----


General information:
TITO was launched using:
RESULT:

Template: 3TNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1548 -49513 -31.99 -180.70
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -31.99
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.535

(partial model without unconserved sides chains):
PDB file : Tito_3TNL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TNL-query.scw
PDB file : Tito_Scwrl_3TNL.pdb: