Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYTKNEEELQALGERLGHLL-----AKNDVLILTGELGAGKTTFTKGLAKGLQISQMIKSPTYTIVREYE--GRLPLYHLDVYRIEGDADSID---LDEFIFGGGVTVIEWGNLLGDALPDAYLELEILKEADGRRLNFQAKGLRAEKLLEELQYGV
1HTW Chain:A ((7-145))-YIPDEFSMLRFGKKFAEILLKLHTEKAIMVYLNGDLGAGKTTLTRGMLQGIGHQGNVKSPTYTLVEEYNIAGKM-IYHFDLYRL-ADPEELEFMGIRDYFNTDSICLIEWSEKGQGILPEADILVNIDYYDDARNIELIAQ---------------


General information:
TITO was launched using:
RESULT:

Template: 1HTW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 588 25983 44.19 201.42
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : 44.19
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_1HTW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HTW-query.scw
PDB file : Tito_Scwrl_1HTW.pdb: