Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKNSIFLLKKRSLKGKESDMRQLAKDINAFLNEVILQAENQHEILIGHCTSEVALTNTQEHILMLLSEESLTNSELARRLNVSQAAVTKAIKSLVKEGMLETSKDSKDARVIFYQLTDLARPIAEEHHHHHEHTLLTYEQVATQFTPNEQKVIQRFLTALVGEIK
5JLU Chain:A ((5-149))---------------------GTLEKKLDNLVNTILLKAENQH---------DVKLTNTQEHILMLLSQQRLTNTDLAKALNISQAAVTKAIKSLVKQDMLAGTKDTVDARVTYFELTELAKPIASEHTHHHDETLNVYNRLLQKFSAKELEIVDKFVTVFAEELE


General information:
TITO was launched using:
RESULT:

Template: 5JLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 345 -56617 -164.11 -416.30
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : -164.11
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_5JLU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5JLU-query.scw
PDB file : Tito_Scwrl_5JLU.pdb: