Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLYSLARPMLFSLAPERAHELTLSMLDKAHKLGIM-RQTVEAK---PTTCMGIEFPNPVGLAAGLDKNGAHIDALAGLGFGFIEIGTITPHPQSGNPKPRLFRIPEAKAIINRMGFNNDGVDKLIENVKASKFRGI--------LGINIGKNADTPVEKAVDDYLICLEKVYNYASYITVNISSPNTKNLRSLQSGDALTELLQALKARQLELAEQYNHYVPLVLKVAPDLTAEDVEFISAQLLDFKIDGLIVTNTTLSREGVENLPYGNESGGLSGAPVFEKSTECLRLFAQTLKGQISLIGVGGILSGEQAAAKQQAGATLVQIYSGLIYTGPTL---VKQCVEAMT
4ORI Chain:A ((18-345))------------LDPESAHRLAV----RVTSLGLLPRATFQDSDMLEVKVLGHKFRNPVGIAAGFDKNGEAVDGLYKLGFGFVEVGSVTPQPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQAQLTADGLPLGINLGKNKTS--EDAAADYAEGVRTLGPLADYLVVNVSSPNT------QGKTELRHLLS--KVLQERDALKGTRKPAVLVKIAPDLTAQDKEDIASVARELGIDGLIVTNTTVSRPVGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRIPIIGVGGVSSGQDALEKIQAGASLVQLYTALIFLGPPVVVRVKRELEAL-


General information:
TITO was launched using:
RESULT:

Template: 4ORI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1798 78743 43.79 256.49
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : 43.79
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.561

(partial model without unconserved sides chains):
PDB file : Tito_4ORI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ORI-query.scw
PDB file : Tito_Scwrl_4ORI.pdb: