Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDKLLKIMQELREK---CPWDQEQTSMSLTKYAIEEAYEVEAAIRQGDINEIRNELGDLLLQVVFQSQMFSEQGAFNFQDVVEAISEKLVRRHPHVFQADQFNNLIPEQVSELWKQIKQQEKQGKPQSRLDEIKHG-PALSQAQEIQKNVAKVGFDFETVEDAYTKLEEELDEF----KQALKNQNSDEIQDEFGDCLFSLVNVGRKLGISSESSLLSTIHKFRSRFAFIEEQAIKQQRTLEDMTLSEMDELWNQAKRQLKSGEKPHAIQHEILEK
3CRC Chain:A ((6-261))IDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHP---------------------------------SALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQA--KLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMT--DLETMEEVWQQVARQ-----------------


General information:
TITO was launched using:
RESULT:

Template: 3CRC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 496 12335 24.87 57.64
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : 24.87
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.384

(partial model without unconserved sides chains):
PDB file : Tito_3CRC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CRC-query.scw
PDB file : Tito_Scwrl_3CRC.pdb: