Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRLDIHLNFIKRLSSMNKEIFKIINPSTLYDPTPNAYSHVAVVSNFNNIIHIAGQGGEDQ-QGQLSSHFSEQVLQTFENINYALVAANAELTDIAVLRILVVDHSVEKHEILI-KIMKDLWKNHPFPACTLIPVPRLALEHMLIEVEATAYT
3LME Chain:A ((3-127))--------------------LKIIAPT---DKTITPSGTWSIGARAGDFVFIGGMHGTDRVTGKMVDGDEARIRRMFDNMLAAAEAAGATKADAVRLTVFVTD--VAKYRPVVNKVQKDIWGDGPYPPRTVLQVPALD-QGDIAEIDGTFY-


General information:
TITO was launched using:
RESULT:

Template: 3LME.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 574 -16987 -29.59 -138.10
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -29.59
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.306

(partial model without unconserved sides chains):
PDB file : Tito_3LME.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LME-query.scw
PDB file : Tito_Scwrl_3LME.pdb: