Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKKGSFMPASTSQYYTRTAQILHWVMAIIFITAWVIGFYSGNFLSYDVDGSFKGDVITLHKNIATTIIFLVVIRLFWRYTHPAPQLPDTMSPTMKTLAHIGHLLLYVILVALPVTGCLFSWSAGHPAPVLYLFEIPRLVQDNPELLAIVKPLHIYISWFAGFLIVGHVLAALKHHFVDKDNVLNSMTKQPK
4GD3 Chain:A ((189-210))--------------------------------------------------------------------------------------------------------------------------------------------------------------WLIGAFVIGHVYMALREDIMSD------------


General information:
TITO was launched using:
RESULT:

Template: 4GD3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3 -840 -280.00 -38.18
target 2D structure prediction score : 0.86
Monomeric hydrophicity matching model chain A : 0.45

3D Compatibility (PKB) : -280.00
2D Compatibility (Sec. Struct. Predict.) : 0.86
1D Compatibility (Hydrophobicity) : 0.45
QMean score : 0.427

(partial model without unconserved sides chains):
PDB file : Tito_4GD3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GD3-query.scw
PDB file : Tito_Scwrl_4GD3.pdb: