Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQLSDINQMNMTTANTARLLITCEDKPGIVQAVSSFLYHQGANITALDQYATEAQGGRYFMRVEFELDHLQSRKDALIQTFAANVAERYGMQWRLAFVNDIKKVGILVSKVDHALLELLWRHARGSLPCEITHVISNHEDLREAVENFG-ILFTVIKVTKDNKAEAYAQIHEMMQGN--DLLVLARYMQILSEDFVSKWEMKIINIHHSFLPAFVGANPYKQAYEKGVKLIGATAHYVTADLDQGPIIEQDVERVSHDYNVEQLRELGEDVERNVLARAVKWHLEDRIIVDGNKTVVF
3NRB Chain:A ((10-285))-------------------LSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDE-DSSKFFMRVSVEIP----VND--FNSAFGKVVEKYNAEWWFRPRTDRKKVVIMVSKFDHCLGDLLYRHRLGELDMEVVGIISNHPREALSVSLVGDIPFHYLPVTPATKAAQESQIKNIVTQSQADLIVLARYMQILSDDLSAFLSGRCINIHHSFLPGFKGAKPYHQAHTRGVKLIGATAHFVTADLDEGPIIAQDVEHVSHRDSAEDLVRKGRDIERRVLSRAVLLFLEDRLIVNGERTVVF


General information:
TITO was launched using:
RESULT:

Template: 3NRB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1316 -114682 -87.14 -424.75
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -87.14
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.529

(partial model without unconserved sides chains):
PDB file : Tito_3NRB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NRB-query.scw
PDB file : Tito_Scwrl_3NRB.pdb: