Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNKQRWMGGVVLLGGGVLLAALLLKGNEEIKQVDVQPQTSTSPKLQAKPKQSAQEGQMVQLQPLAVDVETE---------KRLLEEQRRSREKAVAEQEARAAEFLAMQQQAEADAARKAAAEYA--AIN-ARRAAAQES------SDNIPPEVAGSENKAKGQQTDTKKSVDLAKADADKKAAEAKRLAEADKKAAE-AKRQAEADKKAAEAKRQAE--ADKKAAEAKRQAEADKKAAEAKRKAEAEKKAEAEKARELLENGDKKWMVQVALAANQANADAVVSKLRAKGYKVTTSPTSKGIRIMVGPAKDRDTADTTRKKITSDASLNMKSAWVIDWVPLDQRKSD
4B9Q Chain:A ((391-597))----------------------------------------------------------LLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEA-KMQELAQVSQK-----------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4B9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 566 85608 151.25 460.26
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 151.25
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.357

(partial model without unconserved sides chains):
PDB file : Tito_4B9Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4B9Q-query.scw
PDB file : Tito_Scwrl_4B9Q.pdb: