Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKDIYVEFRGKYKVDGESRDSEHKGWLEVNSWSHNIRQPKSATSSSVGGHTAERVEHSDMVFVKDLDATSPKLWEACSAGYTFDEVQIDFYRANGDKRIKYLQIKLKHVLVSSVTPTVNEEGV--PTEAFGLKYAAVEWTYNQQDINGTAKGAVTKK-WSLSNNTASYAA
3EAA Chain:A ((4-160))--DTYIKLD---KVDGESTDDKHKKWIEVLGFAWGAGNECTMESGTQGLNTG-KAMMSVLRVTKWMDCASVKLASAAVQGQNFPTLELEICTQAGDK-FAFCIYKFTHVAVSSYQCSGATGGSDRPQETIDFAYKEVTWEYVPQDQNGKAGGKIGPEGWSLITN------


General information:
TITO was launched using:
RESULT:

Template: 3EAA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 671 -44402 -66.17 -288.32
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -66.17
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_3EAA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EAA-query.scw
PDB file : Tito_Scwrl_3EAA.pdb: