Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQQALQQPQTLCIKHLAKNYSKRWVVKDVSFSMQSGQIVGLLGPNGAGKTTSFYMVVGLVRMDKGEIHLDDLDMSDRAMHERARKGIGYLPQEASIFRKLTIAENIMSILETRKDLNKQQRQQRLTELLNDFNISHIKDSLGMSVSGGERRRAEIARALAADPKFMLLDEPFAGVDPISVGDIKDIIQTLKDRGIGVLITDHNVRETLAICERAYIVSEGSVIAEGTPQEILDNEQVRKVYLGDDFTV
4QC2 Chain:A ((3-236))---------TLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVKRVYLG-----


General information:
TITO was launched using:
RESULT:

Template: 4QC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1204 -137531 -114.23 -587.74
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.91

3D Compatibility (PKB) : -114.23
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.566

(partial model without unconserved sides chains):
PDB file : Tito_4QC2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QC2-query.scw
PDB file : Tito_Scwrl_4QC2.pdb: