Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAFPHHTEHHAIQRSGWLRASVLGANDGIISVTSLIMGMAASGASSHTLFITCVAGLISGATSMAAGEYISVKSQEDIEKSDLAIEAKELKKYPQKELDELTQIYISRGLSKELAKEVAIQLTTHDALGAHAR-----DEIGIHE-------NTAANPIQAALSSAASFSFGAFFPMLAILFSPEHLI-MPSVLITGIA-------ALAILGALSSYFAGTSKIKGSLRITLWGILAMAFSSWIGSLFNVTPL
5G4J Chain:A ((156-274))--------------------------------------------------------------------------------------------------------------------EITTGLTVHEPLGAHVRALRIPDVSGIAEVDVPVLLEQSLADVDAAIASLQAAGHGVSVFLFDPLFSTEGLLQLPSGYIEGVATRVRAAGGLVISDEVQSGFGRTGS-------GMWGY----------QMFNVEP-


General information:
TITO was launched using:
RESULT:

Template: 5G4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 323 -18677 -57.82 -188.65
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -57.82
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.150

(partial model without unconserved sides chains):
PDB file : Tito_5G4J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5G4J-query.scw
PDB file : Tito_Scwrl_5G4J.pdb: