Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKITALLFALCATVTHAELQTLDNDALQAINGQAGADLSLMLNLNQTSNGIFDNGSGGVCENVEFCHIGLAINKRFVQADTTKPSGWAENSDSGNKLW-------LVFKGVQGTLNIQKMG----LDGADLKYLDKSNTEIIKLAIQLSFSAAQPILIRNFGFNALSIEQDNFTSSTTTQGSSANMYDYAYFKKPTYAATANSANQQVATATPSAYDYGRETGFMGLMMNGNMAIQGKVMVFSCDGSHPRC
4PIB Chain:A ((53-166))-----------------------------------------------------------------------SIGHKYIYMSSDDPRGWSV--DPGNITLNAHVGDTLSFFCASTSDNSEYAAFIYRLTGGD-PHLDPSHVEVIKLQ-----NAAQPTPSNGYPFTTAPVAFSSCDAKVAQQGQAKNFYVWA-------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4PIB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 296 4323 14.60 42.80
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 14.60
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.228

(partial model without unconserved sides chains):
PDB file : Tito_4PIB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PIB-query.scw
PDB file : Tito_Scwrl_4PIB.pdb: