Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIVKRPKRRISMQFGRFRLGMRTIKSALAVFLCILFFHLTQRGIPMIAALSAVFSLRQDLTTTVSFGKSRIIGNTLGGTLAIIYFFVKSYFHNDFLVELILLPILVIIVIVVSDGINNNSGIISAIATLLLIALSIPQGESALYAIQRVLDTFIGTFIAIGINFFLRPPETEKKEELSEDLVELQKKERLLRTNLQEIEAKIQKQKKNSED
5UNF Chain:A ((298-325))-------------------------------------------IPLIFIATCYFGIRKHLLKTNSYGKNRI--------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5UNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 9 402 44.67 14.36
target 2D structure prediction score : 0.82
Monomeric hydrophicity matching model chain A : 0.50

3D Compatibility (PKB) : 44.67
2D Compatibility (Sec. Struct. Predict.) : 0.82
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.297

(partial model without unconserved sides chains):
PDB file : Tito_5UNF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5UNF-query.scw
PDB file : Tito_Scwrl_5UNF.pdb: