Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNVEKLGGKTMTAKISVIMGSTSDWETMKEACQILDEFGVSYEKKVVSAHRTPDLMFEYAQNARKKGIKIIIAGAGGAAHLPGMVASKTTLPVIGVPVQSRTLNGLDSLLSIVQMPGGVPVATTAIGKAGAINAGLLAIQMLSMYDLELEAKLAERRSMLAKTVIESSDQLG
4AY3 Chain:A ((22-179))-----------KSLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILGSFHDDIHDALELRREAIEKDVREGSE---


General information:
TITO was launched using:
RESULT:

Template: 4AY3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 812 -114563 -141.09 -725.08
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.89

3D Compatibility (PKB) : -141.09
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.633

(partial model without unconserved sides chains):
PDB file : Tito_4AY3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AY3-query.scw
PDB file : Tito_Scwrl_4AY3.pdb: