Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYDLHDIVEMKKPHACQTNRWEVIRMGADIKIRCMNCGHIVMMTRR------DFEKKLKKVIEKNAEKE
5GJQ Chain:J ((356-397))--------------------------GAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEK-


General information:
TITO was launched using:
RESULT:

Template: 5GJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 85 5526 65.01 153.50
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain J : 0.69

3D Compatibility (PKB) : 65.01
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.091

(partial model without unconserved sides chains):
PDB file : Tito_5GJQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GJQ-query.scw
PDB file : Tito_Scwrl_5GJQ.pdb: