Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSLSVQELSKNFGHKQALSDVSFSLSPGKIVGLVGPNGAGKTTIMKAILGLIHYSDGTICIGENEISPSSHKGLEQVGALIEYPGIYPFLTGYDHLKL------FSETNDVSAIDTIVNQLKMEKYIHKKAKSYSLGMKQKLGIALALLNHPSIVILDEPMNGLDPQATRDVRKIITDLATQGTSFLISSHLLSELEKMVDELILINQGKIIKQCTMAELNQTAQDFIVISTTNDLAARTILTEAGYTLEDPDKIKLLKENEELLGTVIQLLSAQNIHVTDVQHLTNDLESSLLEILDSVKGEEEK
4RVC Chain:A ((2-223))-TLLEVKDLSGGYTAQNVLEDVTFVVDRGEMVALIGLNGAGKSTTIKHIIGLMEPRRGAISINGYRLADGPETYRRQFAYIPETPVLYEELTLEEHLRLAAMAYGLSEAEYERRLPPLLREFRLERRLSSFPAHFSKGMKQKVMIVCAFLLEPPLYIIDEPFLGLDPLAIHALLERMNEQKAKGAGILLSTHILATAERYCDSFVILHNGRVKAKGTLDDIRR------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4RVC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1076 -57139 -53.10 -264.53
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -53.10
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.593

(partial model without unconserved sides chains):
PDB file : Tito_4RVC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RVC-query.scw
PDB file : Tito_Scwrl_4RVC.pdb: