Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMERFDVERMIQMKIFVVGANGQIGRHLIKDLAPSSHEIFAGVRDVASQTLVKKENVS-YVSFDLTWSVEKMTEAFKGIDVLIFAAGSQ----GKNLLQVDLDGAIKTVIAAENAHVSRYLMVSAVYADEPAKWPESMTDYYITKHYADEWLKRTNLDFVILQPVTLTNDEEVTSIQLTKPNEKASKTITRSTVAAVLAALVEETD-ISRTTLVLSEGSKELNTAFQEWAKEE
3E8X Chain:A ((23-222))------------RVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE---EDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELKRSSLDYTIVRPGPLSNEESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLN-----------------


General information:
TITO was launched using:
RESULT:

Template: 3E8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 991 -23769 -23.98 -122.52
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -23.98
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.513

(partial model without unconserved sides chains):
PDB file : Tito_3E8X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3E8X-query.scw
PDB file : Tito_Scwrl_3E8X.pdb: