Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTFLDLFAGIGGFCLGMEQAGHQCIGFCEIDDFARQSYKAIHDTSKEVEMHDITSVSDEFIQSLGPVDILCGGFPCQAFSIAGKRQGFSDTRGTLFFEIARFAAILQPKFLFLENVRGLLNHEGGATFETILRTLDGLGYDVEWQVLNSKAY-VPQNRERIFLIGHSRDACTEQV-FPIIGSSPTS-DQNIRNLLNINPSNRGMGGQVYGSDDVAPTLTGDEGIKIALPVDDGISVAGMLLGNFEQGNRVYEITGTAPTLSTKQGGTKIMLRKNETEYQEVKPGNSVNLAFPNSTSRRGRLGKQSVHTLLTGDQQAVVTDQYQIRKLTPRECWRLQGFPDWAFDRASQVN-SDSQLYKQAGNSVTVPVIFDIARRLKEVKTDDL
3MHT Chain:A ((12-318))LRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPE---GDITQVNEKTIPDH---DILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRNDLNIQNFQFP----KPFELNTFVKDLLLPDSEVEHL---VIDRKDLVMT---NQEIEQTTPK----TVRLGIVGKGGQGERIYSTRGIAITLSAYGGG----------------------------------IFAKTGGYLVNG----------KTRKLHPRECARVMGYPD-----SYKVHPSTSQAYKQFGNSVVINVLQYIAYNI--------


General information:
TITO was launched using:
RESULT:

Template: 3MHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1680 -102821 -61.20 -339.34
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -61.20
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.432

(partial model without unconserved sides chains):
PDB file : Tito_3MHT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MHT-query.scw
PDB file : Tito_Scwrl_3MHT.pdb: