Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQEIKKLPVIFLGLFFITVGLNWFLLPHDIASAGVGAIGHLVETAFSIQRSVTVWSINLMMLLLAAVLLGKSVFFKTVAGSLLFPVVLEIVPKVEMISSHF-FSLISGSLL---FSLGVYTLYTVGASNGGITIPPIIFHKFFRLPMPQGLLLTNSLIVFLNYYVFGLLETLFVLLSITVSSLFMKILIRLSPVSRKFE
4MQS Chain:A ((44-123))-------------------------------------------------------------------VLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTV--------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4MQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 109 -19243 -176.54 -349.87
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.46

3D Compatibility (PKB) : -176.54
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.46
QMean score : 0.186

(partial model without unconserved sides chains):
PDB file : Tito_4MQS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MQS-query.scw
PDB file : Tito_Scwrl_4MQS.pdb: