Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQPSSDNGASTGANVVVEGKYTIQDANIVGRGAYSVVKVCTPIHPYVPPGSRPGMKYVVKIIEKEYLISLAKGDVDMAMAEIKREIDVLRHIPSHENVVTFLEYVETEKQFLLFFEKVQCGDLCELILQSSSGKLTEEKSKLYTYQIIKAVLHCHLHDIIHRDIKPENLLVSEDD----NIKLTDFGLAKRSRGVCTGDSPRDPLDVTALMMPYPGCERLLGKRVVCSDVIGTPRYGAPEMFYAKFTQTHYD--GFNADTWSIGVVTYITLSGSFPYSPGSNASEKEVFRTIMSTPLPKP--SGISPLAWEFVQSMLNKDPSKRTPLYAALNHPWLADV-----VVQRGSVVAAQLRASVISADVESAAARFDEEARRLRICMAKLQSEVAALREERDRVREVQQPALQETHTQARRAQTPSGLSRPRSTRYPASTIRVSSPARVTNHRRTGSRDSSSAGSVPRRASAPRGRSPLARSAGGAAVRRGTPARAGGTTPARSATPSRTTGARSGSAARAMISTRGATPTRSATPGRSAHDRSRTPHRSAISGTSNGTTSGVSHSTNAVNPANELHLGDQVTYKGCRAIVRFNGSTAFGAGIWIGLEMLEGNEGTNDGSSFIDKKQYFTCPKGKGVFVRASQVKKLG
2A2A Chain:A ((10-295))----------------VEDFYDIGEE--LGSGQFAIVKKCRE--------KSTGLEYAAKFIKKRQSRASRRG---VSREEIEREVSILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---------------------GVE--------FKNIFGTPEFVAPEI-------VNYEPLGLEADMWSIGVITYILLSGASPF-LGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2A2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1312 -47717 -36.37 -174.79
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -36.37
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.394

(partial model without unconserved sides chains):
PDB file : Tito_2A2A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2A2A-query.scw
PDB file : Tito_Scwrl_2A2A.pdb: