Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPPKRPQALEKLHVAPHDKAVSITDTMTLVVKGEGGVEMRVKQTGIAQGPGSSSASGQPKSDAVMNKIKFEDLRIGSELGKGSQGKVRVAQHKITGEKYAMKYIAFDGDSDDMRSALEAELRQVAAVKHHNIVSSYEAFFRDGRLYVVLEYMDCGTMNNLIDRHPEGFSEDMLAYIARELFKGLEFLHHLNMIHRDIKPANVLANTKGEIKISDFGVAKTLSGGDLQTLSAQGSVPYMSPERIQSKPYSFNSDIWSAGLTIAECAFREYPFASLKP-KVFELCQAIASGTAKINWDDRETKFSDEFKEFIELCLRPEAT-RPSATEMLSHSLIQKASNVNPLEAGRWMSPKK
4QMT Chain:A ((36-281))-----------------------------------------------------------------------------KIGKGSFGEVFKGIDNRTQKVVAIKIIDLE-EAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI-------PKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI-------------------


General information:
TITO was launched using:
RESULT:

Template: 4QMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1254 -57574 -45.91 -235.96
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -45.91
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_4QMT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QMT-query.scw
PDB file : Tito_Scwrl_4QMT.pdb: