Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNMTDLKAIQARSLEMAEYFVAFCKEHDLLCYLCGGGAIGALRNKGFIPWDDDLDFFMPRKDYEKLAELWPRYADERYFLSKSHKDFVDRNLFITIRDKKTTCIKPYQQDLDLPHGLALDVLPLDYYPKNPAERKKQVRWALIYSLFCAQTIPEKHGDLMKWGSRILLGLTPKSLRY-RIWKKAEKEMTKYDLADCDGITELCSGPGYMRNKYPITSFEDNLFLPFEGTEMPIPIGYDVYLRTAFGDYMTPPPADKQVPHHDTVIADMDKSYTEYKGEYGG
2XRG Chain:A ((643-783))-----------------------------------------------------------------------------------------------SIPEHLTNCVRP---DVRVSPGFSQNCLAY--------KNDKQMSYGFLFPPYLSSS-PE-----AKYDAFLVTNMVPMYPAFKRVWAYFQRVLVKKYASERNGVNVI-SGPIFDYNYDGLRDTEDEIKQYVEGSSIPVPTHYYSIITSCL-DFTQ--PADK-------------------------


General information:
TITO was launched using:
RESULT:

Template: 2XRG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 444 -11876 -26.75 -84.83
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -26.75
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.239

(partial model without unconserved sides chains):
PDB file : Tito_2XRG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2XRG-query.scw
PDB file : Tito_Scwrl_2XRG.pdb: