Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAYQLPTVWQDEASNQGAFTGLNRPTAGARFEQNLPKGEQAFQLYSLGTPNGVKVTILLEELLEAGFKEAAYDLYKIAIMDGDQFGSDFVKLNPNSKIPALLDQSGTEDVRVFESAHILLYLAEKFG---AFLPSNPVEKVEVLNWLFWQA-GAAPFLGGGFGHFFNYAPEKLEYPI--NRFTMEVKRQLDLLDKELAQKPYIAGNDYTIADIAIWSWYGQLVQGNLYQGSAKFLDASSYQNLVKWAEKIANRPAVKRGLEVTYTEIK
4F0C Chain:A ((16-219))--------------------------------------------------PNGWKVDMLLREL------GLSFETVYVNLGQREHKSPSFTKYNPNGRIPALIDHY-YNDFVVWESDAILLYIVEKYDPEHKFSVSTFDDKIIMTQWLFFQASGQGPYFGQA-GWFLAVAPPEERNPTIAERYQKEILRVFGVLESVLSQRQWLVADKLTIADISFVIWNATAV-NLLVKGYKGFDFEKDFPSVHRWHTALITRPAIAESLKT------


General information:
TITO was launched using:
RESULT:

Template: 4F0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 850 -41605 -48.95 -210.12
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -48.95
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.495

(partial model without unconserved sides chains):
PDB file : Tito_4F0C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F0C-query.scw
PDB file : Tito_Scwrl_4F0C.pdb: