Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------MQNQTASNLPSTQLGKALLCLMTS---ALLFSIMGVCIRFASQTVDNATVVFFRNAVGLFIFIPMLFKQGLDFIKTDKLWMHTWRSIVGLAAMYGFFYAIANLKLSNAMVFSYSSPIFIPLIAWLFLKEKITKSMIFAAVIGLIGVLFVAKPDQGLFNALSFIGLGACFLSAMAFVTVRALTSTEPPERIVFYFCVFGSLISSIPMFWHWRIFTWHELVLLIAAGLLANISQLFMSYAYSLAPAGQIGPMNYIAIIFAGIWGFVFWHELPDLFSIIGIFIILFAILLCNPFLQKKLLSRFK-
2ZCU Chain:A ((1-283))MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQG-VEKLLLISPQHRNVINAAKAAGVKFIAYTSLLH-ADTSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEH------GVFIGAAGDGKI---------ASATRADYAAAAARVISEAGHEGK---VYELAGD-----------SAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSK------TLSKLIGHPTTTLAESVSHLFN


General information:
TITO was launched using:
RESULT:

Template: 2ZCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1452 -76395 -52.61 -292.70
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -52.61
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.198

(partial model without unconserved sides chains):
PDB file : Tito_2ZCU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ZCU-query.scw
PDB file : Tito_Scwrl_2ZCU.pdb: