Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNTSTAKHNYAPDILGAGYEQLTLNFPDDYEGKVVATLVRKKATQPTQKAVLYIHGFLDYFFQTE-MAEQFNAHGYDFYALDLRKYGRSKLPHQIFYNVLDLIEYDAEITQALEIIGQEKHTQVLLAGHSTGGLTATLYAAHHPDHPLIKALWA-NSPFYDFNLSLVEKKFGIPMLSRVGKYLPKVKFPSQLNKWYTTSLHKQLKGEWDFNLDWKPTSAPTVQLSFVHAIHTAQKEIHRGVKLNIPALIMHSHQTKNPRKWGPDATQSDVILDVKDIAKFGKKMKGDVSVVSIHNGLHDLVLSAQPVREQVYQQLFQWLDQKVT
1ZD4 Chain:A ((260-366))-------------------------------------------------AVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVL--CKEMVTFLDKLG---LSQAVFIGHDWGGMLVWYMALFYPER--VRAVASLNTPFIPAN-----------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1ZD4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 463 -38723 -83.63 -368.79
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -83.63
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.497

(partial model without unconserved sides chains):
PDB file : Tito_1ZD4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ZD4-query.scw
PDB file : Tito_Scwrl_1ZD4.pdb: