Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MYDEECPIMANDNHNQVLDEHTEVVVEGDKASAKRARKVKPKT-SDVGSTASLFGIAPYQPK------------KNEEYMSEGQLEH-F-RQIL---QTWKAELMSEVDRTLNTMQDESTALPDVNDRATQEEEFAIELRTRDRERKLIRKIEQSLEAIKNEDYGFCETCGIEIGLR------RLEARPTATLCIDCKTLAEIKEKQNNG----------
4QVU Chain:A ((38-254))DILATEGSIIWLKNKFPTLKDTFQTVLIETDNCEDHIATYTEEHMR----SLIRFSIKHWLNLQKNEEFTSVILYKNHGPFSGGSLHHAHMQIIGMKYVNYLDNVEQDNFQGVIVQKNEHIELNISDRPIIGFTEFNIIIEDIGCIDELANYIQQTVRYILTDFHKGCSSYNLFFYYLNEKIICKVVPRFVVSPLYVGYKIPQVSTKIEDVKIQLAAYFTK


General information:
TITO was launched using:
RESULT:

Template: 4QVU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 843 32866 38.99 180.58
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 38.99
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.110

(partial model without unconserved sides chains):
PDB file : Tito_4QVU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QVU-query.scw
PDB file : Tito_Scwrl_4QVU.pdb: